Usage:
  illumina-dump [options] [ -A ] <accession>
  illumina-dump [options] <path>

  -A|--accession <accession>       Replaces accession derived from <path> in filename(s) and deflines

Options:

  -O|--outdir <path>               Output directory, default is '.'
  -N|--minSpotId <rowid>           Minimum spot id
  -X|--maxSpotId <rowid>           Maximum spot id
  -G|--spot-group                  Split into files by SPOT_GROUP (member name)
  --spot-groups <[list]>           Filter by SPOT_GROUP (member): name[,...]
  -R|--read-filter <[filter]>      Split into files by READ_FILTER value
                                   optionally filter by a value: pass|reject|criteria|redacted
  -T|--group-in-dirs               Split into subdirectories instead of files
  -K|--keep-empty-files            Do not delete empty files
  --table <table-name>             (New) Table name within SRA format, default is SEQUENCE

  -h|--help                        Output a brief explantion for the program
  -V|--version                     Display the version of the program then quit
  -L|--log-level <level>           Logging level as number or enum string
                                   One of (fatal|sys|int|err|warn|info) or (0-5)
                                   Current/default is warn
  -v|--verbose                     Increase the verbosity level of the program
                                   Use multiple times for more verbosity

Format options:

  -r|--read                        Output READ: "seq", default is on
  -q|--qual1 <1|2>                 Output QUALITY, whole spot (1) or split by reads (2): "qcal", default is 1
  -p|--qual4                       Output full QUALITY: "prb", default is off
  -i|--intensity                   Output INTENSITY, if present: "int", default is off
  -n|--noise                       Output NOISE, if present: "nse", default is off
  -s|--signal                      Output SIGNAL, if present: "sig2", default is off
  -x|--qseq <1|2>                  Output QSEQ format: whole spot (1) or split by reads: "qseq", default is off